Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015790612.1_cds_XP_016502621.1_1536
CDS Infomation

[gene=LOC107820790] [db_xref=GeneID:107820790] [protein=glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic-like] [protein_id=XP_016502621.1] [location=complement(join(42633..42765,43024..43430,43544..43593,43695..43756,43836..43996,44640..44807,45088..45249,45549..45656,45753..45851))] [gbkey=CDS]
Sequence

ATGGCTTCCAATGCAGCTTTGGCTTCTTCAAGAATTCCTACAACCACAAGGCTTCCTTCC
AAGAACTCTCACTCTTTCCCTACTCAATGCTTATCCAAGAAATTTGAAGTAGCTGAATTT
GCTGGTCTTAGATCAAGTGGATGTGTGACATTTTCCAACAAAGAGTCTTCTTTCTTTGAT
GTTGTCTCTGCTCAACTCACACCAAAGACCACAGGATCAGCTCCTGTCAAGGGAGAAACT
GTTGCCAAATTGAAGGTTGCTATCAATGGTTTTGGACGCATTGGTAGGAATTTCCTCCGC
TGCTGGCATGGCCGCAAAGATTCACCACTAGATGTCGTGGTTGTCAACGACAGTGGTGGT
GTCAAGAATGCATCTCACTTGCTGAAGTATGATTCAATGCTGGGAACATTCAAAGCTGAT
GTGAAAATAGTGGATAATGAAACCATTAGTGTTGATGGAAAGCACATCAAGGTTGTTTCT
AGCAGAGACCCCCTCAAGCTTCCTTGGGCTGAACTTGGCATCGACATTGTTATTGAGGGA
ACTGGTGTGTTTGTTGATGGTCCAGGTGCTGGGAAGCACATCCAAGCTGGTGCCAAGAAA
GTTATCATCACTGCTCCAGCAAAAGGTGCTGACATTCCTACCTATGTCGTTGGGGTGAAC
GAGCAAGACTACTCTCACGAGGTTGCAGACATCATAAGCAATGCCTCTTGCACCACTAAC
TGCTTGGCTCCTTTTGTAAAGGTCATGGATGAAGAACTTGGTATTGTGAAGGGTACAATG
ACAACAACTCACTCTTACACCGGAGATCAGAGGCTTCTGGATGCTTCACACCGTGACTTG
AGGAGAGCGAGAGCAGCAGCATTGAACATTGTCCCAACCAGTACCGGTGCAGCCAAGGCT
GTGTCTTTAGTGCTACCTCAGCTAAAAGGAAAGCTCAATGGCATTGCTCTCCGTGTGCCA
ACGCCTAATGTTTCGGTTGTTGACCTTGTTGTTAATGTCGCGAAGAAAGGAATTACAGCT
GAGGATGTCAATGCAGCTTTCAGAAAAGCTGCTGATGGTCCATTGAAAGGCGTATTAGCT
GTGTGCGATGAACCTCTTGTTTCAGTTGACTTTAGATGCTCTGATGTTTCATCCACCATC
GACTCATCCTTGACCATGGTTATGGGAGATGATATGGTCAAGGTCGTGGCTTGGTACGAT
AACGAGTGGGGATACAGCCAACGTGTGGTGGATTTGGCTCATCTAGTAGCAAACAAATGG
CCAGGAGTTGCAGTACCAGGAAGTGGAGATCCATTGGATGAGTTTTGCAAGACAAATCCT
GCTGATGAGGAATGCAAAGTCTATGAATAA

Peptide Sequence

PEP ID

XP_016502621.1
PEP Infomation

PREDICTED: glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic-like [Nicotiana tabacum]
Sequence

MASNAALASSRIPTTTRLPSKNSHSFPTQCLSKKFEVAEFAGLRSSGCVTFSNKESSFFD
VVSAQLTPKTTGSAPVKGETVAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGG
VKNASHLLKYDSMLGTFKADVKIVDNETISVDGKHIKVVSSRDPLKLPWAELGIDIVIEG
TGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEQDYSHEVADIISNASCTTN
CLAPFVKVMDEELGIVKGTMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGAAKA
VSLVLPQLKGKLNGIALRVPTPNVSVVDLVVNVAKKGITAEDVNAAFRKAADGPLKGVLA
VCDEPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVVAWYDNEWGYSQRVVDLAHLVANKW
PGVAVPGSGDPLDEFCKTNPADEECKVYE

Transcript Sequence

Gene sequence data has not been registered.